Why Did Jesus Command Us to Pray for Those Who Persecute Us?

Nobody walks into prayer naturally thinking of the person who wronged them first.

The instinct runs the other way.

When someone attacks your name, your livelihood, or your faith, the impulse is to defend, retaliate, or at minimum, to distance.

Jesus knew this. And He gave the command anyway.

“But I tell you, love your enemies and pray for those who persecute you, that you may be children of your Father in heaven.”

Matthew 5:44-45 (NIV)

This single verse sits at the climax of the Sermon on the Mount, and understanding why Jesus said it requires understanding both the moment He said it and the God behind the command.

The Context: A Radical Reversal in the Sermon on the Mount

Matthew 5 records a pattern Jesus uses repeatedly: “You have heard that it was said… but I say to you.”

Each time, He takes a familiar teaching and presses it further than His audience expected.

By verse 43, He addresses a deeply ingrained assumption: “You shall love your neighbor and hate your enemy.”

The command to love your neighbor came from Leviticus 19:18.

The addition about hating enemies was not in the Law itself.

It was a popular interpretation, one that had constricted God’s original intent by treating “neighbor” as covering only fellow Israelites.

Jesus dismantled this narrowing.

And He did not stop at merely forbidding hatred. He commanded active prayer for the persecutor.

The shock was not abstract. His audience lived under Roman occupation.

Crucifixions were visible. Tax burdens were grinding.

The people had real, named enemies with real power. And the man many hoped would free Israel from those enemies commanded them to pray for them.

Dietrich Bonhoeffer, who would later suffer under Nazi persecution himself, called this “the supreme demand”: through prayer, the believer goes to the enemy’s side and pleads for him before God.

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4 Reasons Jesus Gave This Command

Reason 1: It Reflects the Character of God

Jesus gave the theological reason immediately after the command. Praying for persecutors is how disciples become like their Father.

God makes the sun rise on the evil and the good. He sends rain on the just and the unjust (Matthew 5:45).

This is what theologians call common grace: God extends blessing indiscriminately, not only to those who deserve it. If His children are to bear the family likeness, their love must look the same.

When love is limited only to those who love back, Jesus pointed out, even tax collectors do that (Matthew 5:46).

There is nothing distinctively divine about reciprocal affection. What is distinctively divine is the love that does not measure itself by whether it is deserved.

Praying for persecutors is not merely a spiritual discipline. It is a declaration about what God is like.

Reason 2: Prayer Changes What Happens in the One Praying

It is not possible to pray earnestly for someone while also harboring bitterness toward them. The two cannot coexist.

John Chrysostom, the fourth-century bishop, said that prayer for persecutors is the highest summit of self-control, and that we have most conformed our lives to God’s standards when we can genuinely pray this prayer.

Hebrews 12:15 warns about a root of bitterness that defiles many.

GotQuestions rightly notes that praying for enemies “keeps our own hearts free from bitterness.”

The command protects the one who obeys it. When hatred is the response to persecution, the persecutor inflicts two injuries: the original harm, and then the spiritual damage of the hatred that follows. Prayer is how the second injury is refused.

Paul connects the command directly to the interior life of the believer: “Bless those who persecute you; bless and do not curse” (Romans 12:14 ESV). The command moves in the opposite direction from the wound.

Reason 3: The Persecutor May Not Stay a Persecutor

The early church held in living memory a man named Saul of Tarsus.

He not only approved of the stoning of Stephen, but he also supervised it, watching over the cloaks of those who threw the stones (Acts 7:58, 8:1).

The church that prayed for its persecutors was the same church that watched its greatest persecutor become its greatest missionary.

This is not a general principle that promises every persecutor will be converted. But it is a clear biblical witness that prayer for an enemy is never wasted.

The same Paul who presided over Stephen’s murder later wrote: “Bless those who persecute you” (Romans 12:14). He knew both sides of the command.

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Jesus taught that God desires all people to come to repentance (2 Peter 3:9). When a believer prays for a persecutor’s salvation, that prayer aligns perfectly with God’s own desire.

As Spurgeon observed, prayer is the forerunner of mercy, and that is perhaps precisely why Jesus mentioned it here.

Reason 4: Jesus Himself Lived This Command First

The command in Matthew 5:44 is not an abstract ideal. It has already been lived out, completely, under the worst possible conditions.

From the cross, while soldiers cast lots for His clothing and religious leaders mocked, Jesus prayed:

“Father, forgive them, for they do not know what they are doing.”

Luke 23:34 (NIV)

This was not resignation or passive endurance. It was an active intercession for the people killing Him. He asked the Father to forgive the very act being committed against Him in real time.

Stephen followed the pattern directly. As the stones fell, he knelt and cried out: “Lord, do not hold this sin against them” (Acts 7:60).

Chrysostom’s observation holds: what Christ commanded, He first demonstrated. What He demonstrated, His followers repeated. The command is not detached from the example. It is rooted in it.

What This Command Does Not Mean

Praying for persecutors is not the same as excusing persecution. The harm remains real. The wrong remains wrong.

Bonhoeffer was clear: praying for those who persecute us does not excuse what they do. Their evil is between them and God. What is between the believer and God is how the believer responds.

This command does not require pretending that harm is good or placing the believer in continued danger with no recourse.

Paul fled certain cities when his life was threatened. Jesus passed through crowds that sought to harm Him before His appointed time.

The Psalms include prayers for protection. Praying for a persecutor and protecting yourself from ongoing harm are not contradictions.

What the command does require is that the heart’s orientation toward the persecutor be one of genuine desire for their good, not their destruction.

The prayer is not a technique for managing anger. It is intercession: bringing a real person before God and asking for what God wants for them.

A Prayer for Those Who Have Wronged You

Lord, it is hard to pray this prayer. I confess I would rather pray against them than for them. But You prayed for those who nailed You to the cross. Stephen prayed for those who threw the stones. Give me that same Spirit. Soften what has hardened in me. Let me see my persecutors the way You see them: people who need mercy, just as I needed mercy. I pray for their good. I leave the justice to You. Amen.

Frequently Asked Questions

What specifically should you pray for when praying for those who persecute you?

Scripture points toward several focuses: pray for their salvation, since God desires all people to come to repentance (2 Peter 3:9); pray for their hearts to be softened toward God; and ask God to work according to His will (Matthew 6:10). Prayer is the aligning of your will with God’s until you genuinely want what He wants for the person who has harmed you.

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Does praying for persecutors mean you are approving of what they did or excusing the harm?

No. Bonhoeffer addressed this directly: praying for persecutors does not excuse their actions. Their evil remains between them and God. What you are doing is refusing to let their wrong determine your spiritual response. You are interceding for a person while acknowledging the reality of the harm. Jesus did not pretend crucifixion was harmless when He prayed from the cross. He named what was happening and asked the Father to respond with forgiveness, not punishment.

What if I pray and the persecution continues? Does prayer accomplish anything?

Prayer accomplishes something in the one praying before it changes the surrounding circumstances. Hebrews 12:15 warns against bitterness taking root, and regular, genuine prayer keeps the heart free from it. Beyond that internal effect, prayer aligns us with God’s redemptive purposes. Paul’s conversion, which followed Stephen’s martyrdom and likely his final prayer, shows that intercession bears fruit that is not always immediate or visible to us.

How did Jesus and Stephen actually model this command, and why does it matter?

Jesus prayed “Father, forgive them” from the cross as the act of persecution was occurring, not in retrospect (Luke 23:34). Stephen, the first martyr, fell to his knees mid-stoning and prayed “Lord, do not hold this sin against them” (Acts 7:60). Both demonstrate that this command was not theoretical. Chrysostom noted that Jesus both taught and embodied the same principle, which is why Jerome said Christ enjoins not impossibilities but perfection. The examples anchor the command in lived obedience.

Is this command realistic? Is it actually possible to do?

Not in your own strength. Jesus tied the command to becoming “children of your Father” (Matthew 5:45), making it a Spirit-empowered act, not a natural one. It is only through the power of God’s Spirit that believers can truly pray for those who harm them. The command is not a measure of human virtue but an invitation to depend on divine capacity. The prayer can begin even before the feeling follows.

References

Bonhoeffer, D. (1959). The cost of discipleship (6th ed., R. H. Fuller, Trans.). SCM Press.

Carson, D. A. (1984). The sermon on the mount: An evangelical exposition of Matthew 5-7. Baker Book House.

France, R. T. (2007). The Gospel of Matthew (New International Commentary on the New Testament). Eerdmans.

Macarthur, J. (1985). Matthew 1-7 (MacArthur New Testament Commentary). Moody Press.

Osborne, G. R. (2010). Matthew (Zondervan Exegetical Commentary on the New Testament). Zondervan.

Renfroe, A. (2023, September). Praying for those who hurt you: A practical guide. Seedbed Daily Text. Seedbed Publishing.

Stott, J. R. W. (1978). The message of the Sermon on the Mount. InterVarsity Press.

Yancey, P. (2021, March). The hardest prayer in the Bible. Philip Yancey Blog. Zondervan.

Pastor Eve Mercie
Pastor Eve Merciehttps://scriptureriver.com
Pastor Eve Mercie is a seasoned minister and biblical counselor with over 15 years of pastoral ministry experience. She holds a Master of Divinity from Liberty University and has served as both Associate Pastor and Lead Pastor in congregations across the United States. Pastor Eve is passionate about making Scripture accessible and practical for everyday believers. Her teaching combines theological depth with real-world application, helping Christians build authentic faith that sustains them through life's challenges. She has walked alongside hundreds of individuals through spiritual crises, identity struggles, and seasons of doubt, always pointing them back to biblical truth. Through her ministry blog, Pastor Eve addresses the real questions believers ask and the struggles they face in silence, offering wisdom rooted in Scripture and insights gained from years of pastoral experience.
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